From 92499d0d5deb0724817afb17d749a77e90a2ce3d Mon Sep 17 00:00:00 2001 From: Ankur Sinha (Ankur Sinha Gmail) Date: Mar 16 2022 11:05:02 +0000 Subject: [PATCH 1/2] feat: add spec --- diff --git a/python-ephyviewer.spec b/python-ephyviewer.spec new file mode 100644 index 0000000..dfafe9b --- /dev/null +++ b/python-ephyviewer.spec @@ -0,0 +1,63 @@ +Name: python-ephyviewer +Version: 1.5.1 +Release: %autorelease +Summary: Simple viewers for ephys signals, events, video and more + +License: MIT +URL: https://github.com/NeuralEnsemble/ephyviewer +Source0: %{url}/archive/%{version}/%{name}-%{version}.tar.gz + +BuildArch: noarch +BuildRequires: python3-devel +BuildRequires: python3-pytest + + +BuildRequires: python3-matplotlib +BuildRequires: python3-numpy +BuildRequires: python3-scipy +BuildRequires: python3-abi +BuildRequires: python3-pyqtgraph + +%global _description %{expand: +ephyviewer is a Python library based on pyqtgraph for building custom viewers for electrophysiological signals, video, events, epochs, spike trains, data tables, and time-frequency representations of signals. It also provides an epoch encoder for creating annotations.} + +%description %_description + +%package -n python3-ephyviewer +Summary: %{summary} + +%description -n python3-ephyviewer %_description + + +%prep +%autosetup -n ephyviewer-%{version} + + +%generate_buildrequires +%pyproject_buildrequires -r + + +%build +%pyproject_wheel + + +%install +%pyproject_install +%pyproject_save_files ephyviewer + +%check +%if %{with tests} + +%pytest\ + + --deselect tests/test_dataframeview.py\ + --deselect tests/test_standalone.py\ + --deselect tests/test_traceviewer.py\ +%endif + +%files -n python3-ephyviewer -f %{pyproject_files} +%doc README.* + + +%changelog +%autochangelog From 3f0359ba74575a45e66ef12c4598ab3bef309598 Mon Sep 17 00:00:00 2001 From: Ankur Sinha (Ankur Sinha Gmail) Date: Mar 16 2022 14:02:04 +0000 Subject: [PATCH 2/2] feat: update spec to fix build --- diff --git a/python-ephyviewer.spec b/python-ephyviewer.spec index dfafe9b..023c776 100644 --- a/python-ephyviewer.spec +++ b/python-ephyviewer.spec @@ -1,3 +1,5 @@ +%bcond_without tests + Name: python-ephyviewer Version: 1.5.1 Release: %autorelease @@ -12,19 +14,21 @@ BuildRequires: python3-devel BuildRequires: python3-pytest -BuildRequires: python3-matplotlib -BuildRequires: python3-numpy -BuildRequires: python3-scipy -BuildRequires: python3-abi -BuildRequires: python3-pyqtgraph - %global _description %{expand: -ephyviewer is a Python library based on pyqtgraph for building custom viewers for electrophysiological signals, video, events, epochs, spike trains, data tables, and time-frequency representations of signals. It also provides an epoch encoder for creating annotations.} +ephyviewer is a Python library based on pyqtgraph for building custom viewers +for electrophysiological signals, video, events, epochs, spike trains, data +tables, and time-frequency representations of signals. It also provides an +epoch encoder for creating annotations. + +Documentation is available at +https://ephyviewer.readthedocs.io/} %description %_description %package -n python3-ephyviewer Summary: %{summary} +# needs Xvfb +BuildRequires: xorg-x11-server-Xvfb %description -n python3-ephyviewer %_description @@ -32,9 +36,15 @@ Summary: %{summary} %prep %autosetup -n ephyviewer-%{version} +# spikeinterface and av optional and not yet packaged +# https://pagure.io/neuro-sig/NeuroFedora/issue/473 +# av: bindings for ffmpeg so we'll need to see if it can be included in Fedora +# remove pytest-cov +sed -i -e '/spikeinterface/ d' -e '/av/ d' -e '/pytest-cov/ d' requirements-tests.txt + %generate_buildrequires -%pyproject_buildrequires -r +%pyproject_buildrequires -r -x tests %build @@ -48,15 +58,15 @@ Summary: %{summary} %check %if %{with tests} -%pytest\ - - --deselect tests/test_dataframeview.py\ - --deselect tests/test_standalone.py\ - --deselect tests/test_traceviewer.py\ +# some tests segfault with xvfb, so we disable these +# other tests that require unpackaged extra modules or download data +xvfb-run -a -s "-screen 0 1920x1200x24 -ac +extension GLX" pytest-3 \ + -k "not test_spiketrainviewer and not test_timefreqviewer and not test_traceviewer and not test_VideoMultiFileSource and not test_spikeinterface_sources and not test_spikeinterface_viewer and not test_videoviewer and not test_neo_rawio_sources and not test_mainviewer2 and not test_neoviewer" %endif %files -n python3-ephyviewer -f %{pyproject_files} %doc README.* +%{_bindir}/ephyviewer %changelog